International Human Papillomavirus Reference Center

International Human Papillomavirus Reference Center
Human papillomavirus reference clones
a. Assignments are tentative and not official, but might be recommendations to the papillomavirus working group and ICTV.
Virus name Genus name Species name GenBank ID Date submitted Submitted by Reference
HPV1 Mu Mu-1 V01116 L. Gissman Danos et al, 1982
HPV2 Alpha Alpha-4 X55964 L. Gissman Hirsch-Behnam et al, 1990
HPV3 Alpha Alpha-2 X74462 L. Gissman Delius and Hofmann, 1994
HPV4 Gamma Gamma-1 X70827 L. Gissman Egawa et al, 1993
HPV5 Beta Beta-1 M17463 L. Gissman Zachow et al, 1987
HPV6 Alpha Alpha-10 X00203 L. Gissman Schwarz et al, 1983
HPV7 Alpha Alpha-8 X74463 L. Gissman and T. Oltersdorf Delius and Hofmann, 1994
HPV8 Beta Beta-1 M12737 L. Gissman Fuchs et al, 1986
HPV9 Beta Beta-2 X74464 L. Gissman Delius and Hofmann, 1994
HPV10 Alpha Alpha-2 X74465 L. Gissman Delius and Hofmann, 1994
HPV11 Alpha Alpha-10 M14119 L. Gissman Dartmann et al, 1986
HPV12 Beta Beta-1 X74466 G. Orth via L. Gissman Delius and Hofmann, 1994
HPV13 Alpha Alpha-10 X62843 L. Gissman Van Ranst et al, 1992
HPV14 Beta Beta-1 X74467 G. Orth Delius and Hofmann, 1994
HPV15 Beta Beta-2 X74468 G. Orth Delius and Hofmann, 1994
HPV16 Alpha Alpha-9 K02718 M. Durst and L. Gissman Seedorf et al, 1986
HPV17 Beta Beta-2 X74469 G. Orth Delius and Hofmann, 1994
HPV18 Alpha Alpha-7 X05015 M. Boshart Cole and anos, 1987
HPV19 Beta Beta-1 X74470 G. Orth Delius and Hofmann, 1994
HPV20 Beta Beta-1 U31778 G. Orth Kremsdorf et al, 1984
HPV21 Beta Beta-1 U31779 G. Orth Kremsdorf et al, 1984
HPV22 Beta Beta-2 U31780 G. Orth Kremsdorf et al, 1984
HPV23 Beta Beta-2 U31781 G. Orth Kremsdorf et al, 1984
HPV24 Beta Beta-1 U31782 G. Orth Kremsdorf et al, 1984
HPV25 Beta Beta-1 X74471 L. Gissman and H. Pfister Delius and Hofmann, 1994
HPV26 Alpha Alpha-5 X74472 R. Ostrow Delius and Hofmann, 1994
HPV27 Alpha Alpha-4 X74473 R. Ostrow Delius and Hofmann, 1994
HPV28 Alpha Alpha-2 U31783 G. Orth Delius,H. Unpublished
HPV29 Alpha Alpha-2 U31784 G. Orth Delius,H. Unpublished
HPV30 Alpha Alpha-6 X74474 Delius and Hofmann, 1994
HPV31 Alpha Alpha-9 J04353 A. Lorincz Goldsborough at al, 1989
HPV32 Alpha Alpha-1 X74475 G. Orth Delius and Hofmann, 1994
HPV33 Alpha Alpha-9 M12732 G. Orth Cole and Streeck, 1986
HPV34 Alpha Alpha-11 X74476 G. Orth Delius and Hofmann, 1994
HPV35 Alpha Alpha-9 X74477 A. Lorincz Delius and Hofmann, 1994
HPV36 Beta Beta-1 U31785 G. Orth Kawashima et al, 1986
HPV37 Beta Beta-2 U31786 W. Scheurlen Scheurlen et al, 1986
HPV38 Beta Beta-2 U31787 W. Scheurlen Scheurlen et al, 1986
HPV39 Alpha Alpha-7 M62849 G. Orth Volpers and Streeck, 1991
HPV40 Alpha Alpha-8 X74478 E.M. de Villiers Delius and Hofmann, 1994
HPV41 Nu Nu-1 X56147 E.M. de Villiers Hirt et al, 1991
HPV42 Alpha Alpha-1 M73236 G. Orth Philipp et al, 1992
HPV43 Alpha Alpha-8 AJ620205 A. Lorincz Lorincz et al, 1989
HPV44 Alpha Alpha-10 U31788 A. Lorincz Delius,H., Unpublished
HPV45 Alpha Alpha-7 X74479 Z. Naghashfar Delius and Hofmann, 1994
"HPV46" re-classified as HPV20 subtype
HPV47 Beta Beta-1 M32305 M. Ishibashi Kiyono et al, 1990
HPV48 Gamma Gamma-2 U31789 L. Gissman Muller et al, 1989
HPV49 Beta Beta-3 X74480 M. Favre Delius and Hofmann, 1994
HPV50 Gamma Gamma-3 U31790 M. Favre Favre et al, 1989
HPV51 Alpha Alpha-5 M62877 C. Crum Lungu et al, 1991
HPV52 Alpha Alpha-9 X74481 W. Lancaster Delius and Hofmann, 1994
HPV53 Alpha Alpha-6 X74482 L. Gissman Delius and Hofmann, 1994
HPV54 Alpha Alpha-13 U37488 G. Orth Delius,H., Unpublished
"HPV55" re classified as HPV44 subtype M. Favre
HPV56 Alpha Alpha-6 X74483 A. Lorincz Delius and Hofmann, 1994
HPV57 Alpha Alpha-4 X55965 E.M. de Villiers Hirsch-Behnam et al, 1990
HPV58 Alpha Alpha-9 D90400 T. Matsukura Kirii et al, 1991
HPV59 Alpha Alpha-7 X77858 T. Matsukura Rho et al, 1994
HPV60 Gamma Gamma-4 U31792 T. Matsukura Matsukura et al, 1992
HPV61 Alpha Alpha-3 U31793 T. Matsukura Delius,H. Unpublished
HPV62 Alpha Alpha-3 AY395706 T. Matsukura Fu et al, 2004
HPV63 Mu Mu-2 X70828 K. Egawa Egawa et al, 1993
"HPV64" re-classified as HPV34 subtype
HPV65 Gamma Gamma-1 X70829 T. Matsukura Egawa et al, 1993
HPV66 Alpha Alpha-6 U31794 G. Orth Delius,H., Unpublished
HPV67 Alpha Alpha-9 D21208 T. Matsukura Kirii et al, 1998
HPV68 Alpha Alpha-7 X67161 G. Orth Longuet et al, 1996
HPV69 Alpha Alpha-5 AB027020 T. Matsukura Kino et al, 2000
HPV70 Alpha Alpha-7 U21941 G. Orth Forslund and Hansson, 1996
HPV71 Alpha Alpha-14 AB040456 T. Matsukura Matsukura and Sugase, 2001
HPV72 Alpha Alpha-3 X94164 Y. He Volter et al, 1996
HPV73 Alpha Alpha-11 X94165 Y. He Volter et al, 1996
HPV74 Alpha Alpha-10 AF436130 G. Orth Burk and Terai, Unpublished
HPV75 Beta Beta-3 Y15173 V. Shamanin and E.M. de Villiers Delius et al, 1998
HPV76 Beta Beta-3 Y15174 E.M. de Villiers Delius et al, 1998
HPV77 Alpha Alpha-2 Y15175 V. Shamanin Delius et al, 1998
HPV78 Alpha Alpha-2 AB793779 T. Matsukura Sata et al, unpublished
"HPV79" replaced by HPV91 G. Orth Terai and Burk, 2012
HPV80 Beta Beta-2 Y15176 K. Bergmann Delius et al, 1998
HPV81 Alpha Alpha-3 AJ620209 T. Matsukura Matsukura and Sugase, 2001
HPV82 Alpha Alpha-5 AB027021 T. Matsukura Kino et al, 2000
HPV83 Alpha Alpha-3 AF151983 K.H. Fife and D. Brown Brown et al, 1999
HPV84 Alpha Alpha-3 AF293960 R. Burk Terai and Burk, 2001
HPV85 Alpha Alpha-7 AF131950 V. Chow Chow and Leong, 1999
HPV86 Alpha Alpha-3 AF349909 R. Burk Terai and Burk, 2001
HPV87 Alpha Alpha-3 AJ400628 S. Menzo Menzo et al, 2001
HPV88 Gamma Gamma-5 EF467176 K. Egawa Kullander et al, 2008
HPV89 Alpha Alpha-3 AF436128 R. Burk Terai and Burk, 2002
HPV90 Alpha Alpha-14 AY057438 R. Burk Terai and Burk, 2002
HPV91 Alpha Alpha-8 AF419318 R. Burk Terai and Burk, 2002
HPV92 Beta Beta-4 AF531420 O. Forslund Forslund et al, 2003
HPV93 Beta Beta-1 AY382778 O. Forslund Vasiljevic et al, 2007
HPV94 Alpha Alpha-2 AJ620211 E.M. de Villiers de Villiers et al, 2009
HPV95 Gamma Gamma-1 AJ620210 E.M. de Villiers and K. Egawa Egawa et al, 2005
HPV96 Beta Beta-5 AY382779 O. Forslund Vasiljevic et al, 2007
HPV97 Alpha Alpha-7 DQ080080 R. Burk Chen and Burk, 2007
HPV98 Beta Beta-1 FM955837 E.M. de Villiers de Villiers and Gunst, 2009
HPV99 Beta Beta-1 FM955838 E.M. de Villiers de Villiers and Gunst, 2009
HPV100 Beta Beta-2 FM955839 E.M. de Villiers de Villiers and Gunst, 2009
HPV101 Gamma Gamma-6 DQ080081 R. Burk Chen et al, 2007
HPV102 Alpha Alpha-3 DQ080083 R. Burk Narechania et al, 2005
HPV103 Gamma Gamma-6 DQ080078 R. Burk Chen et al, 2007
HPV104 Beta Beta-2 FM955840 E.M de Villiers de Villiers and Gunst, 2009
HPV105 Beta Beta-1 FM955841 E.M. de Villiers de Villiers and Gunst, 2009
HPV106 Alpha Alpha-14 DQ080082 R. Burk Narechania et al, 2005
HPV107 Beta Beta-2 EF422221 J. Kullander and O. Forslund Vasiljevic et al, 2008
HPV108 Gamma Gamma-6 FM212639 R. Nobre and E.M. de Villiers Nobre et al, 2009
HPV109 Gamma Gamma-7 EU541441 J. Kullander and O. Forslund Ekstrom et al, 2010
HPV110 Beta Beta-2 EU410348 N. Vasiljevic and O. Forslund Vasiljevic et al, 2008
HPV111 Beta Beta-2 EU410349 N. Vasiljevic and O. Forslund Vasiljevic et al, 2008
HPV112 Gamma Gamma-8 EU541442 J. Kullander and O. Forslund Ekstrom et al, 2010
HPV113 Beta Beta-2 FM955842 E.M. de Villiers de Villiers and Gunst, 2009
HPV114 Alpha Alpha-3 GQ244463 J. Kullander and O. Forslund Ekstrom et al, 2010
HPV115 Beta Beta-3 FJ947080 A. Giri Chouhy et al, 2010
HPV116 Gamma Gamma-9 FJ804072 L. Li and E. Delwart Li et al, 2009
HPV117 Alpha Alpha-2 GQ246950 I. Nindl Kohler et al, 2010
HPV118 Beta Beta-1 GQ246951 I. Nindl Köhler et al, 2010
HPV119 Gamma Gamma-8 GQ845441 R. Burk Bernard et al, 2010
HPV120 Beta Beta-2 GQ845442 R. Burk Bernard et al, 2010
HPV121 Gamma Gamma-10 GQ845443 R. Burk Bernard et al, 2010
HPV122 Beta Beta-2 GQ845444 R. Burk Bernard et al, 2010
HPV123 Gamma Gamma-7 GQ845445 R. Burk Bernard et al, 2010
HPV124 Beta Beta-1 GQ845446 R. Burk Bernard et al, 2010
HPV125 Alpha Alpha-2 FN547152 A. Kovanda, B. Kocjan and M. Poljak Kovanda et al, 2011
HPV126 Gamma Gamma-11 AB646346 N. Egawa Egawa et al, 2012
HPV127 Gamma Gamma-12 HM011570 C. Buck Schowalter et al, 2010
HPV128 Gamma Gamma-13 GU225708 I. Nindl Kohler et al, 2011
HPV129 Gamma Gamma-9 GU233853 I. Nindl Kohler et al, 2011
HPV130 Gamma Gamma-10 GU117630 I. Nindl Kohler et al, 2011
HPV131 Gamma Gamma-14 GU117631 I. Nidl Kohler et al, 2011
HPV132 Gamma Gamma-12 GU117632 I. Nidl Kohler et al, 2011
HPV133 Gamma Gamma-10 GU117633 I. Nidl Kohler et al, 2011
HPV134 Gamma Gamma-7 GU117634 I. Nidl Kohler et al, 2011
HPV135 Gamma Gamma-15 HM999987 R. Burk Bottalico et al, 2011
HPV136 Gamma Gamma-11 HM999988 R. Burk Bottalico et al, 2011
HPV137 Gamma Gamma-16 HM999989 R. Burk Bottalico et al, 2011
HPV138 Gamma Gamma-7 HM999990 R. Burk Chen et al, Unpublished
HPV139 Gamma Gamma-7 HM999991 R. Burk Chen et al, Unpublished
HPV140 Gamma Gamma-11 HM999992 R. Burk and Z. Chen Bottalico et al, 2011
HPV141 Gamma Gamma-11 HM999993 R. Burk and Z. Chen Bottalico et al, 2011
HPV142 Gamma Gamma-10 HM999994 R. Burk and Z. Chen Chen,et al, Unpublished
HPV143 Beta Beta-1 HM999995 R. Burk and Z. Chen Bottalico et al, 2011
HPV144 Gamma Gamma-17 HM999996 R. Burk and Z. Chen Bottalico et al, 2011
HPV145 Beta Beta-2 HM999997 R. Burk and Z. Chen Bottalico et al, 2011
HPV146 Gamma Gamma-15 HM999998 R. Burk and Z. Chen Chen et al, Unpublished
HPV147 Gamma Gamma-8 HM999999 R. Burk and Z. Chen Chen et al, Unpublished
HPV148 Gamma Gamma-12 GU129016 I. Nidl Kohler et al, 2011
HPV149 Gamma Gamma-7 GU117629 I. Nidl Kohler et al, 2011
HPV150 Beta Beta-5 FN677755 A. Kovanda, B. Kocjan and M. Poljak Kovanda et al, 2011
HPV151 Beta Beta-2 FN677756 A. Kovanda, B. Kocjan and M. Poljak Kovanda et al, 2011
HPV152 Beta Beta-1 JF304768 R. Burk and Z. Chen Chen et al, unpublished
HPV153 Gamma Gamma-13 JN171845 H. Johansson and O. Forslund Sturegard et al, 2013
HPV154 Gamma Gamma-11 NC_021483 O. Forslund and A. Ure Ure and Forslund
HPV155 Gamma Gamma-7 JF906559 H. Johansson and O. Forslund Bzhalava et al, 2013
HPV156 Gamma Gamma-18 JX429973 D. Chouhy Chouhy et al, 2013
HPV157 Gamma Gamma-12 KT698166 D. Chouhy Bolatti et al, 2016
HPV158 Gamma Gamma-1 KT698168 D. Chouhy Bolatti et al, 2016
HPV159 Beta Beta-2 HE963025 B. Kocjan and M. Poljak Kocjan et al, 2013
HPV160 Alpha Alpha-2 AB745694 T. Kiyono Mitsuishi et al, 2013
HPV161 Gamma Gamma-19 JX413109 J. Li Li et al, 2012
HPV162 Gamma Gamma-19 JX413108 J. Li Li et al, 2012
HPV163 Gamma Gamma-20 JX413107 J. Li Li et al, 2012
HPV164 Gamma Gamma-8 JX413106 J. Li Li et al, 2012
HPV165 Gamma Gamma-12 JX444072 J. Li Li et al, 2012
HPV166 Gamma Gamma-19 JX413104 J. Li Li et al, 2012
HPV167 Gamma Gamma-21 NC_022892 J. Li Li et al, 2012
HPV168 Gamma Gamma-8 KC862317 J. Li Li et al, 2012
HPV169 Gamma Gamma-11 JX413105 J. Li Li et al, 2012
HPV170 Gamma Gamma-7 JX413110 J. Li Li et al, 2012
HPV171 Gamma Gamma-11 KF006398 Q. Feng Martin et al, 2013
HPV172 Gamma Gamma-22 a KF006399 Q. Feng Martin et al, 2013
HPV173 Gamma Gamma-1 KF006400 Q. Feng Martin et al, 2013
HPV174 Beta Beta-2 HF930491 B. Kocjan and M. Poljak Kocjan et al, 2013
HPV175 Gamma Gamma-23 a KC108721 H. Johansson and O. Forslund Johansson et al, 2013
HPV176 Gamma Gamma-8 R. Burk
HPV177 Alpha Alpha-11 R. Burk
HPV178 Gamma Gamma-24 a KJ130020 H. Johansson and O. Forslund
HPV179 Gamma Gamma-15 HG421739 Hosnjak L., B. Kocjan and M. Poljak Hosnjak et al, 2015
HPV180 Gamma Gamma-10 KC108722 H. Johansson and O. Forslund Johansson et al, 2013
HPV181 Gamma Gamma-11 R. Burk
HPV182 Beta Beta-2 R. Burk
HPV183 Gamma Gamma-20 R. Burk
HPV184 Gamma Gamma-25 a HG530535 Hosnjak L., B. Kocjan and M. Poljak Hosnjak et al, 2015
HPV185 Beta Beta-5 R. Burk
HPV186 Gamma Gamma-7 R. Burk
HPV187 Gamma Gamma-26 a R. Burk
HPV188 Gamma Gamma-3 R. Burk
HPV189 Gamma Gamma-7 R. Burk
HPV190 Gamma Gamma-24 a R. Burk
HPV191 Gamma Gamma-10 R. Burk
HPV192 Gamma Gamma-15 R. Burk
HPV193 Gamma Gamma-7 R. Burk
HPV194 Gamma Gamma-20 R. Burk
HPV195 Beta Beta-1 R. Burk
HPV196 Beta Beta-1 R. Burk
HPV197 Gamma Gamma-24 a KM085343 S. Arroyo Arroyo et al, 2014
HPV198 Beta Beta-2 S. Arroyo Arroyo et al, Unpublished
HPV199 Gamma Gamma-12 KJ913662 A. Ostrbenk, B. Kocjan and M. Poljak Ostrbenk et al, 2015
HPV200 Gamma Gamma-2 KP692114 S. Arroyo Arroyo et al, Unpublished
HPV201 Gamma Gamma-27 a KP692115 S. Arroyo Arroyo et al, Unpublished
HPV202 Gamma Gamma-11 KP692116 S. Arroyo Arroyo et al, Unpublished
HPV203 Gamma S. Arroyo Arroyo et al, Unpublished
HPV204 Mu KP769769 B. Kocjan and M. Poljak Kocjan et al, 2015
HPV205 Gamma Gamma-1 KT698167 E. Bolatti Bolatti et al, 2016
HPV206 H. Pfister
HPV207 Bueno
HPV208 Bueno
HPV209 Beta Beta-2 E. Bolatti Bolatti et al, Unpublished
HPV210 Gamma Gamma-12 E. Bolatti Bolatti et al, Unpublished